Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901735.1_cds_XP_016451788.1_46097
CDS Infomation

[gene=LOC107776406] [db_xref=GeneID:107776406] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016451788.1] [location=complement(join(1569..2339,2747..3349))] [gbkey=CDS]
Sequence

ATGGAAGATGAGTGGGTGATCAAGATAAACGATGAGCTGATACACGTCGAGGATCTTACT
AGTGTGGAGGCCGAGCACTGGAAGAAGCGGTCCATTTATAGAGTGCCTGTCTGTGTCACA
GATATGAACAAGAAAGCTTACAAGCCTCAGGTAGTTTCGTTTGGTCCTTACCATAATGGA
GAAAATCATCTCAAGGAAATGGAAGTTCACAAGCACCGAGCTCTTCTTCACTTCCTCAAG
CGATCTGGAAAACCTTTAACGTGTTATATTGACTCCTTACAACAAGTAGTTCAAGAGCTG
AAAGATTCATATGATTCGCTGGATCCTGCTTGGCAAAGTGATACTAATGGCTTCTTGCGC
TTGATGATTTTCGATGGCTGCTTCATGTTGGAGATATTGAGAACAGCTGATGATGATCGT
CAACCTATAGATCAATCTCAGCATGCTCAACCGCATGACTATGCTCCTAATGATCCTATT
TTCAGCAATCATGGAAAGCTCCATCTCATGCCTTATCTCAAGCGCGATATGCTCATGCTT
GAAAATCAGTTGCCTATGCTCCTTCTAGACAAATTACTCGCTATTGAAAATCAAGAGGCA
AAGAGTGATCTGTTACTCCTTGATTGCATTCAGCAGTATGACGAGGAATGTATTAATAAA
CTCATACTGGACTTCTGCAATCCTCACAGCCGTGCTAAAGGACTTGGGAAGTGTTTGCAT
GTATTGGATGTGTACAGAAAGAGCCTACTTTGGGAAGATCCCATGTTGCTCAAGACTCGT
CCTAGAAAAGCACCAAAAGTTAGTTACCAGAGTGGTGGCGATGAGATCATCCGCTCTGCC
ATGGAGCTGAATGAAGCAGGCATTCGGTTTAAGAAGAGTAAAACCGGGAGCCTCAAGGAC
ATCTCCTTTCATGGCGGTATCCTTGAGCTTCCTCTGATCCTGGTGGACGATGCTACAGAA
TCAATGTTCTTAAACCTAATAGCATTTGAGAGATTGCACGTGGGGGCGGGGAATGAGGTA
ACATCATACATCTTTTTCATGGATAACATTATTGACAATGTCAAAGATGTTAGCTTGCTA
CACTCTTGTGGCATTATTCAGAATGCAATTGGCAGCGATAACGCTGTAGCCAAGCTATTC
AATTCACTATCCAAGGACATTACACTGGATCCAGATAGCAGTCTAGATCTGGTGCACAAG
CTGGTGAGCGATTACTGCAAGTATCCGTGGAATGAATGGAGAGCTAATCTCATTCACACC
TACTTCAGGAGTCCCTGGGCCATTTTATCTGTTGTTGCTGCTATTTTTCTTTTCGCCCTC
ACCATTGTTTCGACAGTATACGGGGTATATGGTTACTATTATCCCCCTTCCTAA

Peptide Sequence

PEP ID

XP_016451788.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MEDEWVIKINDELIHVEDLTSVEAEHWKKRSIYRVPVCVTDMNKKAYKPQVVSFGPYHNG
ENHLKEMEVHKHRALLHFLKRSGKPLTCYIDSLQQVVQELKDSYDSLDPAWQSDTNGFLR
LMIFDGCFMLEILRTADDDRQPIDQSQHAQPHDYAPNDPIFSNHGKLHLMPYLKRDMLML
ENQLPMLLLDKLLAIENQEAKSDLLLLDCIQQYDEECINKLILDFCNPHSRAKGLGKCLH
VLDVYRKSLLWEDPMLLKTRPRKAPKVSYQSGGDEIIRSAMELNEAGIRFKKSKTGSLKD
ISFHGGILELPLILVDDATESMFLNLIAFERLHVGAGNEVTSYIFFMDNIIDNVKDVSLL
HSCGIIQNAIGSDNAVAKLFNSLSKDITLDPDSSLDLVHKLVSDYCKYPWNEWRANLIHT
YFRSPWAILSVVAAIFLFALTIVSTVYGVYGYYYPPS

Transcript Sequence

Gene sequence data has not been registered.